BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D01LP1|AL425104
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig978 1699 0.0
>3x_Contig978
Length = 3477
Score = 1699 bits (856), Expect = 0.0
Identities = 880/887 (99%), Gaps = 5/887 (0%)
Strand = Plus / Minus
Query: 1 tcagggtctgtgtcccaatgttcatgaagacagaagaagtatcttttgattactttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 tcagggtctgtgtcccaatgttcatgaagacagaagaagtatcttttgattactttttaa 1826
Query: 61 agttcatttcgttacgttaataaaaaaggagaagggaagaagaaaagagaagagactata 120
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 1825 agttcatttcgttacgttaataaaaaaggagaagggaagaagaag-gag----gactata 1771
Query: 121 tagtctcattatgcaagtgtgagggatgaaaagataggaaggagaagagctgatcggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1770 tagtctcattatgcaagtgtgagggatgaaaagataggaaggagaagagctgatcggtgg 1711
Query: 181 cgattcacttgaaaagactcttcaatttggagaagaacccactctttgatgatttttcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 cgattcacttgaaaagactcttcaatttggagaagaacccactctttgatgatttttcgt 1651
Query: 241 ccacgtgactcgatccgttgtctccagtggaggaattcttagagcccttctcatcccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 ccacgtgactcgatccgttgtctccagtggaggaattcttagagcccttctcatcccttt 1591
Query: 301 tctttcttgacgatttagggcttagtatgttcccagcaccacctctaccgatcgatatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1590 tctttcttgacgatttagggcttagtatgttcccagcaccacctctaccgatcgatatgg 1531
Query: 361 tctttggaggttccgagaagcgtctcgacttgatctttttgatggttcctgtattgtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 tctttggaggttccgagaagcgtctcgacttgatctttttgatggttcctgtattgtttg 1471
Query: 421 aagaagtcacgtctatcacgtcgtcatcgtcaacatcctgtgcggtgcgtgtcataaccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 aagaagtcacgtctatcacgtcgtcatcgtcaacatcctgtgcggtgcgtgtcataaccg 1411
Query: 481 ggtccacattcctcctcatattaccagcaccaccgcgacccgtagagtaaattggcgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 ggtccacattcctcctcatattaccagcaccaccgcgacccgtagagtaaattggcgata 1351
Query: 541 gtatattgggggtctgggaaccctgtgtcacaaccttcggtgaaggtttctcgttcgacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 gtatattgggggtctgggaaccctgtgtcacaaccttcggtgaaggtttctcgttcgacg 1291
Query: 601 ttatcatgtttcctgcgcctcctcttccagtacttactctatattcacccatgccgatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 ttatcatgtttcctgcgcctcctcttccagtacttactctatattcacccatgccgatat 1231
Query: 661 attgaataatctcccaaagatactttctttattattgcgttgccaaacaactattccaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 attgaataatctcccaaagatactttctttattattgcgttgccaaacaactattccaga 1171
Query: 721 ttaggtccacttgtcacgagcctatatcacaatggttagattggaccaacaactattaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 ttaggtccacttgtcacgagcctatatcacaatggttagattggaccaacaactattaaa 1111
Query: 781 tggatgcacattttatgttttcaatactgacatgtatatataaaawaggttcggatcgag 840
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1110 tggatgcacattttatgttttcaatactgacatgtatatataaaaaaggttcggatcgag 1051
Query: 841 agttgatcattaattgtgtgttggtcaaggaatcgatgataagggac 887
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 agttgatcattaattgtgtgttggtcaaggaatcgatgataagggac 1004
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7095
Number of Sequences: 1807
Number of extensions: 7095
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)